The Cedars-Sinai Cancer Bioinformatics Core is looking for a talented candidate who is going to serve as a Research Bioinformatician III. This core will provide state-of-the-art bioinformatics services and consulting, proposing the best practice of existing computational pipelines, mathematical modeling, statistical analysis methods, and machine learning approaches.
Research Bioinformatician II will collaborate with biomedical investigators in implementaing and designing studies. Major responsibilities are in solving complex computational and mathematical problems as they relate to interpreting biological data; independently designing and developing computational, mathematical, and statistical methods to analyze biological data and facilitate the interpretation of analysis results. Research Bioinformatician III will also work with bioinformatics faculties to determine future bioinformatics needs, and helps to develop tools and pipelines as necessary to keep pace with rapid advances in various omics technologies. Lead designing and implementing multi-omics research projects and mainly responsible for data analysis including sequence alignment, peptide database search, polymorphism identification, pathway/gene-set enrichment analysis, pattern recognition, identification of biomarker/regulator candidates, data integration and deconvolution, and network modeling.
Summarizes and visualizes data analyses results in the form suitable as the basis for the first draft of written reports, and makes preliminary interpretations of the data.
Develop, test, and maintain omics data analysis pipelines for high-throughput sequencing data, mass-based proteomics and metabolomics data, and mullti-modal single cell omics data.
Manages data including loading and querying data from database systems, downloading omic data from public repositories, and transforming data to the necessary formats.
Familiar with medical and biological terminologies, bioinformatics resources, and national biological databases, Ready to provide solutions for investigator's problems through data mining and extraction.
Identify, evaluate, and incorporate relevant algorithms and software pipelines by reviewing pertinent literatures in bioinformatics and computational biology
Assists or collaborate in preparation of grant proposals, publications, and presentations involving omic data
Educate others about bioinformatics through mentoring of and teaching colleagues, investigators, fellows, and graduate students.
Master of Science Degree in Biology, Computer Science, Electric Engineering, Computational biology, or Bioinformatics, or Master of Science/ Engineering in relevant fields (e.g. Biology with strong quantitative training, biostatistics with concentration in bioinformatics), Required
PhD in Systems Biology, Computer Science, Computational Biology, or a directly related field of research specialization, Preferred
7 years in research environment
Background and work knowledge in algorithms, scientific computing, and machine learning or statistics
Familiar with C/C++, Java, Perl, python, R, and the Unix (Linux) environment
Experiences in manipulating, analyzing, and annotating genomic (e.g. NGS) and proteomics data sets both in exploratory and pipelined fashions
Working Title: Research Bioinformatician II - Cedars-Sinai Cancer Bioinformatics Core
Providing healthcare for more than 100 years, Cedars-Sinai has evolved into one of the most dynamic and highly renowned medical centers in the world. Along with caring for patients, Cedars-Sinai is a hub for biomedical research and a training center for future physicians and other healthcare professionals. This attracts exceptional talent to Cedars-Sinai, including world-renowned physician-scientists who seek a place where they can both conduct research and see patients--the ideal formula for discovery and its translation into cures. Our patients benefit from access to doctors at the top of their fields, and our researchers have an ideal community in which to study the impact of healthcare challenges, and reflect that knowledge in their research. The greater Los Angeles area in which Cedars-Sinai resides possesses unparalleled cultural and ethnic diversity which offers outstanding opportunities for translational and clinical research and a dynamic environment for medical education.Although community based, Cedars-Sinai is a major t...eaching hospital affiliated with the David Geffen School of Medicine at the University of California, Los Angeles (UCLA). Cedars-Sinai has highly competitive graduate medical education programs in more than 50 specialty and subspecialty areas, a graduate program in biomedical sciences and translational medicine, a clinical scholars program directed towards junior physicians with aspirations to become clinical scientists, and post graduate training opportunities.There are more than 250 full-time faculty members at Cedars-Sinai. The voluntary medical staff, comprised of more than 2,200 specialty board-certified or board-qualified physicians, represent all of the specialties and subspecialties and collaborate with full-time medical staff in the teaching responsibilities of the graduate medical education programs.